CDS

Accession Number TCMCG051C51152
gbkey CDS
Protein Id XP_024448942.1
Location complement(43524..45038)
Gene LOC112325979
GeneID 112325979
Organism Populus trichocarpa

Protein

Length 504aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024593174.1
Definition lycopene beta cyclase, chloroplastic/chromoplastic isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description Lycopene beta cyclase
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R03824        [VIEW IN KEGG]
R04801        [VIEW IN KEGG]
R05341        [VIEW IN KEGG]
R06962        [VIEW IN KEGG]
R07856        [VIEW IN KEGG]
KEGG_rclass RC01004        [VIEW IN KEGG]
RC01964        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K06443        [VIEW IN KEGG]
EC 5.5.1.19        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009509        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009975        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016109        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016117        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016860        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045436        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATACTTTGTTGAAAACACATAACAAGATTGAATTTTTGCCTCAATTTCATGGGTTTTCGGAGAAAGTGAGTAATTCGAGCTCCGTAAAGATTCAAATCCAGGAACTTAGGTTTGGTCCCAAAAAGTTTTTTTCAAAAGTGGGGAGGAATGGTTGTGTTGAGGCTAGTAGTAGTGCACTTTTGGAGCTTGTACCAGAAACCAAGAAGGAAAATCTTGAGTTTGATCTTCCTATGTATGACCCATCGAAAGGCCTTGTAGTTGACCTTGCAGTTGTGGGGGGAGGTCCTGCAGGGCTTGCTGTTGCTCAGCAAGTTTCGGAGGCAGGGCTCTCGGTTTGTTCGATTGATCCATCTCCTCAGTTGATTTGGCCTAATAATTATGGTGTTTGGGTTGATGAATTTGATGCCATGGGTTTGCTTGACTGCCTTGATACCACTTGGTCTGGTGCTGTTGTCTATGTTAATGACAAGACAAAAAAAGATCTTGATAGGCCTTATGGGAGGGTTAATAGGAAGCAGCTGAAGTCCAAAATGTTACAGAAATGCATATCCAATGGTGTTAAGTTTCACCAAGCTAAAGTTATCAAGGTTATTCATGAGGAGTCCAAATCTCTATTGATTTGCAATGATGGTGTCACAATCCAAGCTGTCGTGGTTCTTGATGCAACTGGTTTTTCTAGATGCCTTGTTCAATATGACAAGCCATATAATCCAGGTTACCAAGTGGCTTATGGAATTTTGGCAGAGGTAGAAGAGCACCCGTTTGATGTTGATAAGATGGTTTTTATGGATTGGAGAGATTCACATCTGAACAACAATCTGGAACTAAAAGAGAGAAACAGCAAGACCCCTACTTTCCTCTACGCAATGCCCTTTTCATCGGACAGGATATTTCTGGAAGAAACTTCCCTCGTAGCTAGGCCTGGAGTACCCATGAAAGATATACAGGAAAGGATGGTGGCCAGATTAAGGCACCTAGGTATAAAAGTGAAAAGCATAGAGGAAGATGAGCGTTGTGTCATTCCAATGGGGGGACCACTTCCTGTGCTCCCTCAAAGAGTAGTTGGAATTGGTGGTACAGCCGGTATGGTGCACCCTTCAACTGGGTATATGGTAGCAAGAACTCTAGCAGCTGCTCCGATTGTTGCTAATTCTATCGTTCAGTATCTTGGTTCTGATAGAAGCTTTTCAGGAAGTGAGTTATCAGCTAAAGTTTGGAAAGATTTATGGCCCGTCGAGAGGAGGAGACAAAGAGAGTTCTTCTGTTTTGGTATGGATATTTTGCTTAAGCTTGATTTACCTGCCACAAGAAGATTTTTTGATGCATTTTTTGATCTGGAACCTCATTATTGGCACGGATTCCTATCATCTCGACTGTTTCTACCTGAGCTTGTACTTTTTGGGCTTTCACTGTTCTCCCATGCTTCTAATACTTCTAGGTTAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTTAATATGACCAACAATTTAATACAGGACAGAGAATAG
Protein:  
MDTLLKTHNKIEFLPQFHGFSEKVSNSSSVKIQIQELRFGPKKFFSKVGRNGCVEASSSALLELVPETKKENLEFDLPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPQLIWPNNYGVWVDEFDAMGLLDCLDTTWSGAVVYVNDKTKKDLDRPYGRVNRKQLKSKMLQKCISNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAVVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNNNLELKERNSKTPTFLYAMPFSSDRIFLEETSLVARPGVPMKDIQERMVARLRHLGIKVKSIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQYLGSDRSFSGSELSAKVWKDLWPVERRRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPHYWHGFLSSRLFLPELVLFGLSLFSHASNTSRLEIMAKGTLPLVNMTNNLIQDRE